ارزیابی استخراج ستونی و غیر ستونی ژن ها از بافت های پارافنی سرطان کبد
Validation of Total RNA Spin-column and Non-column Extraction Methods for microRNA Expression Analyses in Formalin-fixed Paraffin-Embedded Liver Samples
نویسندگان: زهرا آصفی , علیرضا ابهری , بهروز شکوهی گوگانی , زینب لطیفی , سعید نظری سلطان احمد , ناصر صمدی , محمد نوری
کلمات کلیدی: Keywords: Spin column extraction, miRNA, FFPE
نشریه: 0 , 3 , Vol. 6 , 2019
| نویسنده ثبت کننده مقاله |
محمد نوری |
| مرحله جاری مقاله |
تایید نهایی |
| دانشکده/مرکز مربوطه |
بیماری های گوارش و کبد |
| کد مقاله |
71684 |
| عنوان فارسی مقاله |
ارزیابی استخراج ستونی و غیر ستونی ژن ها از بافت های پارافنی سرطان کبد |
| عنوان لاتین مقاله |
Validation of Total RNA Spin-column and Non-column Extraction Methods for microRNA Expression Analyses in Formalin-fixed Paraffin-Embedded Liver Samples |
| ناشر |
8 |
| آیا مقاله از طرح تحقیقاتی و یا منتورشیپ استخراج شده است؟ |
بلی |
| عنوان نشریه (خارج از لیست فوق) |
Crescent Journal of Medical and Biological Sciences |
| نوع مقاله |
Original Article |
| نحوه ایندکس شدن مقاله |
ایندکس شده سطح یک – ISI - Web of Science |
| آدرس لینک مقاله/ همایش در شبکه اینترنت |
|
| Abstract
Objectives: MicroRNAs are small (19–23nt) noncoding RNAs that adjust gene expression post-transcriptionally. In addition,
microRNA (miRNA) profile modification is revealed in various abnormalities including cancer. Formalin-fixed paraffinembedded (FFPE) material archives are valued for searching human diseases. Therefore, the present study aimed to investigate
FFPE samples for miRNA expression, as an alternative analyte for gene expression with the growing therapeutic and diagnostic
potential. Further, the validity of RNA isolation kits was evaluated in order to identify a preferred method.
Materials and Methods: The two extracted methods were qualitatively and quantitatively assessed in order to compare the
archived specimens between these methods. The total RNA and gene expression were quantified in each method as well.
Results: Based on the results, the level of RNA extracted from FFPE tissues and real-time polymerase chain reaction (RT-PCR) of
hsa-miR-623, hsa-miR-515-5pin miRNeasy FFPE (P value<0.047) was significantly higher than that in RNAX Plus (P<0.084).
Conclusions: In general, the spin column method for miRNA expression profile had better expression compared to the noncolumn method. The results further confirmed the validity of FFPE tissues as an appropriate resource for miRNA analyses. |
| نام فایل |
تاریخ درج فایل |
اندازه فایل |
دانلود |
| pdf_CJMB_317.pdf | 1399/01/25 | 195259 | دانلود |